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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0482s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 271aa MW: 31122 Da PI: 9.8324 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.9 | 5.7e-25 | 53 | 180 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrk.nratksgyWka 85 p+G rF+P+d el+++yL++k g +e ++ ++d+yk++P+++p kv+ + + ++y F++ k + +g++k +r t +g Wk SapurV1A.0482s0030.1.p 53 PVGWRFNPSDIELLDYYLRAKKYGGGPICEGIFGDFDLYKYDPQNIPqDKVHRHCNgRMYIFTPIYKLHINGSKKgKRNTPNGHWKM 139 79*****************9988888677689***************546655555588********99998766156********* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +v+++ +g+++g++ +L+f++g+++k t+W+m e+rl SapurV1A.0482s0030.1.p 140 NSSPIPVIENnDGQTIGTRSSLAFFDGHKRK---TRWLMYEFRL 180 ******999878999**********877765...********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.62E-26 | 51 | 186 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.921 | 52 | 202 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-15 | 53 | 180 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MSTPISKTSW RTSWDADRAL QAAAEPRHQD QIREAFRSLS ASAKLMDWSK FGPVGWRFNP 60 SDIELLDYYL RAKKYGGGPI CEGIFGDFDL YKYDPQNIPQ DKVHRHCNGR MYIFTPIYKL 120 HINGSKKGKR NTPNGHWKMN SSPIPVIENN DGQTIGTRSS LAFFDGHKRK TRWLMYEFRL 180 VDPPTQADEN QGMWFIGRKN TEYWTIIGNN YVERTLGSDE FNSKPKRCHS LVLFDNTGNY 240 SMEQSHKKLK YARDIGGIST SNSNSITSIF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-16 | 53 | 180 | 16 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002308423.1 | 1e-149 | hypothetical protein POPTR_0006s19350g | ||||
TrEMBL | B9HBF6 | 1e-149 | B9HBF6_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0006s19350.1 | 1e-148 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF23203 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.1 | 6e-18 | NAC domain containing protein 61 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0482s0030.1.p |